Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 20190507.A-S1a_undiff_R1-subsample 20190507.A-S1a_undiff_R1-subsample.fastq.gz Conventional base calls Sanger / Illumina 1.9 100000.0 0.0 151.0 47.0 99.383 151.0 151 pass pass pass pass fail pass pass pass pass pass fail 20190507.A-S2_undiff_R1-subsample 20190507.A-S2_undiff_R1-subsample.fastq.gz Conventional base calls Sanger / Illumina 1.9 100000.0 0.0 151.0 55.0 98.623 151.0 151 pass pass warn pass fail warn pass pass pass pass fail 20190507.A-S3_undiff_R1-subsample 20190507.A-S3_undiff_R1-subsample.fastq.gz Conventional base calls Sanger / Illumina 1.9 100000.0 0.0 151.0 47.0 99.453 151.0 151 pass pass pass pass fail pass pass pass pass pass fail 20190507.A-S4_diff_R1-subsample 20190507.A-S4_diff_R1-subsample.fastq.gz Conventional base calls Sanger / Illumina 1.9 100000.0 0.0 151.0 49.0 99.381 151.0 151 pass pass warn pass fail pass pass pass pass pass fail 20190507.A-S5_diff_R1-subsample 20190507.A-S5_diff_R1-subsample.fastq.gz Conventional base calls Sanger / Illumina 1.9 100000.0 0.0 151.0 55.0 97.286 151.0 151 pass pass pass pass fail warn pass pass pass pass fail 20190507.A-S6_diff_R1-subsample 20190507.A-S6_diff_R1-subsample.fastq.gz Conventional base calls Sanger / Illumina 1.9 100000.0 0.0 151.0 50.0 99.291 151.0 151 pass pass pass pass fail warn pass pass pass pass fail